TY - JOUR
T1 - Weakly-Supervised Vessel Detection in Ultra-Widefield Fundus Photography via Iterative Multi-Modal Registration and Learning
AU - Ding, Li
AU - Kuriyan, Ajay E.
AU - Ramchandran, Rajeev S.
AU - Wykoff, Charles C.
AU - Sharma, Gaurav
N1 - Funding Information:
Manuscript received August 6, 2020; accepted September 21, 2020. Date of publication September 29, 2020; date of current version September 30, 2021. This work was supported in part by the University of Rochester Research Award, in part by the Distinguished Researcher Award from the New York State funded Rochester Center of Excellence in Data Science at the University of Rochester under Grant CoE #3B C160189, in part by an unrestricted grant to the Department of Ophthalmology from Research to Prevent Blindness, and in part by the National Institutes of Health under Grant P30EY001319-35. (Corresponding author: Gaurav Sharma.) Li Ding and Gaurav Sharma are with the Department of Electrical and Computer Engineering, University of Rochester, Rochester, NY 14627 USA (e-mail: l.ding@rochester.edu; gaurav.sharma@ rochester.edu).
Publisher Copyright:
© 1982-2012 IEEE.
PY - 2021/10/1
Y1 - 2021/10/1
N2 - We propose a deep-learning based annotation-efficient framework for vessel detection in ultra-widefield (UWF) fundus photography (FP) that does not require de novo labeled UWF FP vessel maps. Our approach utilizes concurrently captured UWF fluorescein angiography (FA) images, for which effective deep learning approaches have recently become available, and iterates between a multi-modal registration step and a weakly-supervised learning step. In the registration step, the UWF FA vessel maps detected with a pre-trained deep neural network (DNN) are registered with the UWF FP via parametric chamfer alignment. The warped vessel maps can be used as the tentative training data but inevitably contain incorrect (noisy) labels due to the differences between FA and FP modalities and the errors in the registration. In the learning step, a robust learning method is proposed to train DNNs with noisy labels. The detected FP vessel maps are used for the registration in the following iteration. The registration and the vessel detection benefit from each other and are progressively improved. Once trained, the UWF FP vessel detection DNN from the proposed approach allows FP vessel detection without requiring concurrently captured UWF FA images. We validate the proposed framework on a new UWF FP dataset, PRIME-FP20, and on existing narrow-field FP datasets. Experimental evaluation, using both pixel-wise metrics and the CAL metrics designed to provide better agreement with human assessment, shows that the proposed approach provides accurate vessel detection, without requiring manually labeled UWF FP training data.
AB - We propose a deep-learning based annotation-efficient framework for vessel detection in ultra-widefield (UWF) fundus photography (FP) that does not require de novo labeled UWF FP vessel maps. Our approach utilizes concurrently captured UWF fluorescein angiography (FA) images, for which effective deep learning approaches have recently become available, and iterates between a multi-modal registration step and a weakly-supervised learning step. In the registration step, the UWF FA vessel maps detected with a pre-trained deep neural network (DNN) are registered with the UWF FP via parametric chamfer alignment. The warped vessel maps can be used as the tentative training data but inevitably contain incorrect (noisy) labels due to the differences between FA and FP modalities and the errors in the registration. In the learning step, a robust learning method is proposed to train DNNs with noisy labels. The detected FP vessel maps are used for the registration in the following iteration. The registration and the vessel detection benefit from each other and are progressively improved. Once trained, the UWF FP vessel detection DNN from the proposed approach allows FP vessel detection without requiring concurrently captured UWF FA images. We validate the proposed framework on a new UWF FP dataset, PRIME-FP20, and on existing narrow-field FP datasets. Experimental evaluation, using both pixel-wise metrics and the CAL metrics designed to provide better agreement with human assessment, shows that the proposed approach provides accurate vessel detection, without requiring manually labeled UWF FP training data.
KW - Retinal vessel detection
KW - multi-modal registration
KW - noisy labels
KW - ultra-widefield fundus photography
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U2 - 10.1109/TMI.2020.3027665
DO - 10.1109/TMI.2020.3027665
M3 - Article
C2 - 32991281
AN - SCOPUS:85096836424
VL - 40
SP - 2748
EP - 2758
JO - IEEE Transactions on Medical Imaging
JF - IEEE Transactions on Medical Imaging
SN - 0278-0062
IS - 10
ER -