TY - JOUR
T1 - Postmortem genetic screening for the identification, verification, and reporting of genetic variants contributing to the sudden death of the young
AU - Methner, D. Nicole R
AU - Scherer, Steven E.
AU - Welch, Katherine
AU - Walkiewicz, Magdalena
AU - Eng, Christine M.
AU - Belmont, John W.
AU - Powell, Mark C.
AU - Korchina, Viktoriya
AU - Doddapaneni, Harsha Vardhan
AU - Muzny, Donna M.
AU - Gibbs, Richard A.
AU - Wolf, Dwayne
AU - Sanchez, Luis
AU - Kahn, Roger
N1 - Funding Information:
We thank the contributions of the additional members of the Molecular Autopsy Consortium of Houston (MATCH), including Amy L. McGuire, Quianta Moore, Mary Majumder, Salma Nassef, Sandra Darilek, Katie Rutherford, Stacey Pereira, V. Reid Sutton, Art Beaudet, Eric Boerwinkle, L. Maximilian Buja, Thomas Caskey, Sherhonda Harper, Katelyn Weymouth, Albert Chu, Nicholas Lykos, and Thomas Wheeler. We also acknowledge the following BCM-HGSC contributors to the primary data generation and analysis: Jianhong Hu, Christian Buhay, and Jeffrey Reid. This project was supported by Award No. 2010-DN-BX-K230, awarded by the National Institute of Justice, Office of Justice Programs, US Department of Justice. The opinions, findings, and conclusions or recommendations expressed in this publication are those of the authors and do not necessarily reflect those of the Department of Justice.
Publisher Copyright:
© 2016 Methner et al.
PY - 2016/9
Y1 - 2016/9
N2 - Each year in the United States, thousands of cases of sudden and unexpected deaths of infants, children, and young adults are assigned an undetermined cause of death after postmortem investigation and autopsy. Heritable genetic variants have been suggested as the cause of up to a third of sudden death (SD) cases. Elucidation of the genetic variants involved in SD cases is important to not only help establish cause and manner of death of these individuals, but to also aid in determining whether familial genetic testing should be considered. Previously, these types of postmortem screenings have not been a feasible option for most county medical examiners' and coroners' offices. We sequenced full exons of 64 genes associated with SD in the largest known cohort (351) of infant and young SD decedents using massively parallel sequencing at <$600 per sample. Genetic variants were assessed through literature review and clinical evaluation by a multidisciplinary consortium of experts. Thirteen individuals (3.7%), eight infants (2.8% of those <1 yr of age) and five children/young adults (7.0% of those >1 yr of age), were found to have a reportable genetic variant contributing to SD. These percentages represent an estimate lower than those previously reported. Overall yields and results likely vary between studies due to differences in evaluation techniques and reporting. Additionally, we recommend ongoing assessment of data, including nonreported novel variants, as technology and literature continually advance. This study demonstrates a strategy to implement molecular autopsies in medicolegal investigations of young SD decedents.
AB - Each year in the United States, thousands of cases of sudden and unexpected deaths of infants, children, and young adults are assigned an undetermined cause of death after postmortem investigation and autopsy. Heritable genetic variants have been suggested as the cause of up to a third of sudden death (SD) cases. Elucidation of the genetic variants involved in SD cases is important to not only help establish cause and manner of death of these individuals, but to also aid in determining whether familial genetic testing should be considered. Previously, these types of postmortem screenings have not been a feasible option for most county medical examiners' and coroners' offices. We sequenced full exons of 64 genes associated with SD in the largest known cohort (351) of infant and young SD decedents using massively parallel sequencing at <$600 per sample. Genetic variants were assessed through literature review and clinical evaluation by a multidisciplinary consortium of experts. Thirteen individuals (3.7%), eight infants (2.8% of those <1 yr of age) and five children/young adults (7.0% of those >1 yr of age), were found to have a reportable genetic variant contributing to SD. These percentages represent an estimate lower than those previously reported. Overall yields and results likely vary between studies due to differences in evaluation techniques and reporting. Additionally, we recommend ongoing assessment of data, including nonreported novel variants, as technology and literature continually advance. This study demonstrates a strategy to implement molecular autopsies in medicolegal investigations of young SD decedents.
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U2 - 10.1101/gr.195800.115
DO - 10.1101/gr.195800.115
M3 - Article
C2 - 27435932
AN - SCOPUS:84984950121
VL - 26
SP - 1170
EP - 1177
JO - Genome Research
JF - Genome Research
SN - 1088-9051
IS - 9
ER -