TY - JOUR
T1 - Maternal variation in EPHX1, a xenobiotic metabolism gene, is associated with childhood medulloblastoma
T2 - An exploratory case-parent triad study
AU - Lupo, Philip J.
AU - Nousome, Darryl
AU - Okcu, M. Fatih
AU - Chintagumpala, Murali
AU - Scheurer, Michael E.
N1 - Funding Information:
The genotyping for this work was supported by an Inter-Institutional Pilot Project (to Michael E. Scheurer and Philip J. Lupo) from the Dan L. Duncan Cancer Center at Baylor College of Medicine, P30CA125123 (PI: Osborne). M.E.S. was also supported in part by an NCI Career Development Award, K07CA131505.
PY - 2012/11
Y1 - 2012/11
N2 - Common epidemiologic study designs used for evaluating germline genetic determinants of childhood medulloblastoma are often subject to population stratification bias and do not account for maternal genetic effects, a proxy for the intrauterine environment, which may be important in determining etiologic factors for this outcome. The case-parent triad design overcomes these limitations. Therefore, we conducted an exploratory study among 27 childhood medulloblastoma case-parent triads recruited from the Childhood Cancer Epidemiology and Prevention Center at Texas Children's Hospital (Houston, USA) between 2003 and 2010. We assessed 13 single nucleotide polymorphisms (SNPs) in nine xenobiotic detoxification genes, as deficiencies in this pathway may induce brain tumorigenesis. Log-linear modeling was used to assess the association between medulloblastoma and both the offspring (i.e., case) and maternal genotypes of each SNP. In our population, there were no offspring genotypes that were significantly associated with disease risk. However, the maternal EPHX1 rs1051740 genotype (RR 3.26, P .01) was associated with medulloblastoma risk. This exploratory study highlights the utility of the case-parent triad design, but these results should be interpreted cautiously due to the limited sample size.
AB - Common epidemiologic study designs used for evaluating germline genetic determinants of childhood medulloblastoma are often subject to population stratification bias and do not account for maternal genetic effects, a proxy for the intrauterine environment, which may be important in determining etiologic factors for this outcome. The case-parent triad design overcomes these limitations. Therefore, we conducted an exploratory study among 27 childhood medulloblastoma case-parent triads recruited from the Childhood Cancer Epidemiology and Prevention Center at Texas Children's Hospital (Houston, USA) between 2003 and 2010. We assessed 13 single nucleotide polymorphisms (SNPs) in nine xenobiotic detoxification genes, as deficiencies in this pathway may induce brain tumorigenesis. Log-linear modeling was used to assess the association between medulloblastoma and both the offspring (i.e., case) and maternal genotypes of each SNP. In our population, there were no offspring genotypes that were significantly associated with disease risk. However, the maternal EPHX1 rs1051740 genotype (RR 3.26, P .01) was associated with medulloblastoma risk. This exploratory study highlights the utility of the case-parent triad design, but these results should be interpreted cautiously due to the limited sample size.
KW - Case-parent triad
KW - Epidemiology
KW - Genetic polymorphisms
KW - Medulloblastoma
KW - Xenobiotic detoxification
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U2 - 10.3109/08880018.2012.722747
DO - 10.3109/08880018.2012.722747
M3 - Article
C2 - 22994552
AN - SCOPUS:84867950931
SN - 0888-0018
VL - 29
SP - 679
EP - 685
JO - Pediatric Hematology and Oncology
JF - Pediatric Hematology and Oncology
IS - 8
ER -