Interpretability in healthcare: A comparative study of local machine learning interpretability techniques

Radwa ElShawi, Youssef Sherif, Mouaz Al-Mallah, Sherif Sakr

Research output: Contribution to journalArticle

Abstract

Although complex machine learning models (eg, random forest, neural networks) are commonly outperforming the traditional and simple interpretable models (eg, linear regression, decision tree), in the healthcare domain, clinicians find it hard to understand and trust these complex models due to the lack of intuition and explanation of their predictions. With the new general data protection regulation (GDPR), the importance for plausibility and verifiability of the predictions made by machine learning models has become essential. Hence, interpretability techniques for machine learning models are an area focus of research. In general, the main aim of these interpretability techniques is to shed light and provide insights into the prediction process of the machine learning models and to be able to explain how the results from the prediction was generated. A major problem in this context is that both the quality of the interpretability techniques and trust of the machine learning model predictions are challenging to measure. In this article, we propose four fundamental quantitative measures for assessing the quality of interpretability techniques—similarity, bias detection, execution time, and trust. We present a comprehensive experimental evaluation of six recent and popular local model agnostic interpretability techniques, namely, LIME, SHAP, Anchors, LORE, ILIME“ and MAPLE on different types of real-world healthcare data. Building on previous work, our experimental evaluation covers different aspects for its comparison including identity, stability, separability, similarity, execution time, bias detection, and trust. The results of our experiments show that MAPLE achieves the highest performance for the identity across all data sets included in this study, while LIME achieves the lowest performance for the identity metric. LIME achieves the highest performance for the separability metric across all data sets. On average, SHAP has the smallest average time to output explanation across all data sets included in this study. For detecting the bias, SHAP and MAPLE enable the participants to better detect the bias. For the trust metric, Anchors achieves the highest performance on all data sets included in this work.

Original languageEnglish (US)
JournalComputational Intelligence
DOIs
StateAccepted/In press - 2020

Keywords

  • big data
  • data science
  • interpretability
  • machine learning

ASJC Scopus subject areas

  • Computational Mathematics
  • Artificial Intelligence

Fingerprint Dive into the research topics of 'Interpretability in healthcare: A comparative study of local machine learning interpretability techniques'. Together they form a unique fingerprint.

Cite this