Abstract
CLUSFAVOR (CLUSter and Factor Analysis with Varimax Orthogonal Rotation) 5.0 standardizes input data; sorts data according to gene-specific coefficient of variation, standard deviation, average and total expression, and Shannon entropy; performs hierarchical cluster analysis using nearest-neighbor, unweighted pair-group method using arithmetic averages (UPGMA), or furthest-neighbor joining methods, and Euclidean, correlation, or jack-knife distances; and performs principal-component analysis.
| Original language | English (US) |
|---|---|
| Pages (from-to) | SOFTWARE0002 |
| Journal | Genome Biology |
| Volume | 3 |
| Issue number | 7 |
| State | Published - Jun 24 2002 |
| Externally published | Yes |
ASJC Scopus subject areas
- Ecology, Evolution, Behavior and Systematics
- Genetics
- Cell Biology