An adaptive space-filling curve trajectory for ordering 3d datasets to 1d: Application to brain magnetic resonance imaging data for classification

Unal Sakoglu, Lohit Bhupati, Nazanin Beheshti, Nikolaos Tsekos, Lennart Johnsson

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Abstract

In this work, we develop an adaptive, near-optimal, 3-Dimensional (3D) to 1D ordering methodology for brain magnetic resonance imaging (MRI) data, using a space-filling curve (SFC) trajectory, which is adaptive to brain’s shape as captured by MRI. We present the pseudocode of the heuristics for developing the SFC trajectory. We apply this trajectory to functional MRI brain activation maps from a schizophrenia study, compress the data, obtain features, and perform classification of schizophrenia patients vs. normal controls. We compare the classification results with those of a linear ordering trajectory, which has been the traditional method for ordering 3D MRI data to 1D. We report that the adaptive SFC trajectory-based classification performance is superior than the linear ordering trajectory-based classification.

Original languageEnglish (US)
Title of host publicationComputational Science – ICCS 2020 - 20th International Conference, Proceedings
EditorsValeria V. Krzhizhanovskaya, Gábor Závodszky, Michael H. Lees, Peter M.A. Sloot, Peter M.A. Sloot, Peter M.A. Sloot, Jack J. Dongarra, Sérgio Brissos, João Teixeira
PublisherSpringer Science and Business Media Deutschland GmbH
Pages635-646
Number of pages12
ISBN (Print)9783030504199
DOIs
StatePublished - 2020
Event20th International Conference on Computational Science, ICCS 2020 - Amsterdam, Netherlands
Duration: Jun 3 2020Jun 5 2020

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume12139 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference20th International Conference on Computational Science, ICCS 2020
Country/TerritoryNetherlands
CityAmsterdam
Period6/3/206/5/20

Keywords

  • Adaptive compression
  • Classification
  • MRI
  • Neuroimaging
  • Space-filling curve

ASJC Scopus subject areas

  • Theoretical Computer Science
  • General Computer Science

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