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2022
Current progress and open challenges for applying deep learning across the biosciences
Sapoval, N., Aghazadeh, A., Nute, M. G., Antunes, D. A., Balaji, A., Baraniuk, R., Barberan, C. J., Dannenfelser, R., Dun, C., Edrisi, M., Elworth, R. A. L., Kille, B., Kyrillidis, A., Nakhleh, L., Wolfe, C. R., Yan, Z., Yao, V. & Treangen, T. J., Dec 2022, In: Nature Communications. 13, 1, 1728.Research output: Contribution to journal › Review article › peer-review
Open Access -
Current understandings and clinical translation of nanomedicines for breast cancer therapy
Jiang, Y., Jiang, Z., Wang, M. & Ma, L., Jan 2022, In: Advanced Drug Delivery Reviews. 180, 114034.Research output: Contribution to journal › Review article › peer-review
1 Scopus citations -
Day Care Attendance and Infectious Complications in Children Born to Mothers With Inflammatory Bowel Disease
Long, M. D., Siegel, C. A., Abraham, B. P., Chiorean, M. & Mahadevan, U., Mar 2022, In: Clinical Gastroenterology and Hepatology. 20, 3, p. 706-708.e1Research output: Contribution to journal › Short survey › peer-review
1 Scopus citations -
Debates in cardiac CT: The force of data is with CAC — and it's rock solid
Cainzos-Achirica, M. & Nasir, K., Jul 1 2022, In: Journal of cardiovascular computed tomography. 16, 4, p. 286-289 4 p.Research output: Contribution to journal › Review article › peer-review
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Decisions With Patients and Families Regarding Aducanumab in Alzheimer Disease, With Recommendations for Consent: AAN Position Statement
the Ethics, Law, and Humanities Committee (a joint committee of the AAN, ANA, and CNS), Jan 25 2022, In: Neurology. 98, 4, p. 154-159 6 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Decoding neural activity preceding balance loss during standing with a lower-limb exoskeleton using an interpretable deep learning model
Sujatha Ravindran, A., Malaya, C. A., John, I., Francisco, G. E., Layne, C. & Contreras-Vidal, J. L., May 26 2022, In: Journal of neural engineering. 19, 3, 036015.Research output: Contribution to journal › Article › peer-review
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Dedifferentiation-mediated stem cell niche maintenance in early-stage ductal carcinoma in situ progression: insights from a multiscale modeling study
Butner, J. D., Dogra, P., Chung, C., Ruiz-Ramírez, J., Nizzero, S., Plodinec, M., Li, X., Pan, P. Y., Chen, S. H., Cristini, V., Ozpolat, B., Calin, G. A. & Wang, Z., May 2022, In: Cell Death and Disease. 13, 5, 485.Research output: Contribution to journal › Article › peer-review
Open Access -
Dedifferentiation-mediated stem cell niche maintenance in early-stage ductal carcinoma in situ progression: insights from a multiscale modeling study
Butner, J. D., Dogra, P., Chung, C., Ruiz-Ramírez, J., Nizzero, S., Plodinec, M., Li, X., Pan, P-Y., Chen, S-H., Cristini, V., Ozpolat, B., Calin, G. A. & Wang, Z., May 21 2022, In: Cell death & disease. 13, 5, p. 485Research output: Contribution to journal › Article › peer-review
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Deep brain stimulation of the “medial forebrain bundle”: sustained efficacy of antidepressant effect over years
Fenoy, A. J., Schulz, P. E., Sanches, M., Selvaraj, S., Burrows, C. L., Asir, B., Conner, C. R., Quevedo, J. & Soares, J. C., May 2022, In: Molecular Psychiatry. 27, 5, p. 2546-2553 8 p.Research output: Contribution to journal › Article › peer-review
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DEEPHULL: FAST CONVEX HULL APPROXIMATION IN HIGH DIMENSIONS
Balestriero, R., Wang, Z. & Baraniuk, R. G., 2022, 2022 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2022 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 3888-3892 5 p. (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; vol. 2022-May).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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Deep Learning for Automated Analysis of Cellular and Extracellular Components of the Foreign Body Response in Multiphoton Microscopy Images
Sarti, M., Parlani, M., Diaz-Gomez, L., Mikos, A. G., Cerveri, P., Casarin, S. & Dondossola, E., Jan 25 2022, In: Frontiers in Bioengineering and Biotechnology. 9, 797555.Research output: Contribution to journal › Article › peer-review
Open Access -
Deep learning for biomechanical modeling of facial tissue deformation in orthognathic surgical planning
Lampen, N., Kim, D., Fang, X., Xu, X., Kuang, T., Deng, H. H., Barber, J. C., Gateno, J., Xia, J. & Yan, P., May 2022, In: International Journal of Computer Assisted Radiology and Surgery. 17, 5, p. 945-952 8 p.Research output: Contribution to journal › Article › peer-review
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DeepStroke: An efficient stroke screening framework for emergency rooms with multimodal adversarial deep learning
Cai, T., Ni, H., Yu, M., Huang, X., Wong, K., Volpi, J., Wang, J. Z. & Wong, S. T. C., Aug 2022, In: Medical Image Analysis. 80, 102522.Research output: Contribution to journal › Article › peer-review
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Defining High-risk Retinoblastoma: A Multicenter Global Survey
Kaliki, S., Shields, C. L., Cassoux, N., Munier, F. L., Chantada, G., Grossniklaus, H. E., Yoshikawa, H., Fabian, I. D., Berry, J. L., McKenzie, J. D., Kimani, K., Reddy, M. A., Parulekar, M., Tanabe, M., Furuta, M., Grigorovski, N., Chevez-Barrios, P., Scanlan, P., Eagle, R. C., Rashid, R. & 8 others, , Jan 2022, In: JAMA Ophthalmology. 140, 1, p. 30-36 7 p.Research output: Contribution to journal › Article › peer-review
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Defining the mammalian coactivation of hepatic 12-h clock and lipid metabolism
Meng, H., Gonzales, N. M., Jung, S. Y., Lu, Y., Putluri, N., Zhu, B., Dacso, C. C., Lonard, D. M. & O'Malley, B. W., Mar 8 2022, In: Cell Reports. 38, 10, 110491.Research output: Contribution to journal › Article › peer-review
Open Access -
Defining Vasoplegia Following Durable, Continuous Flow Left Ventricular Assist Device Implantation
Swan, J. T., Iso, T., Rizk, E., Trachtenberg, B. H., Krisl, J., Varnado, S., Suki, W. N., Frost, A. E., Suarez, E., Uddin, F. S., Kassi, M., Giesecke, N. M., Bhimaraj, A. & Masud, F. N., Jan 1 2022, In: ASAIO Journal. 68, 1, p. 46-55 10 p.Research output: Contribution to journal › Article › peer-review
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Definitive Intensity-Modulated Chemoradiation for Anal Squamous Cell Carcinoma: Outcomes and Toxicity of 428 Patients Treated at a Single Institution
Holliday, E. B., Morris, V. K., Johnson, B., Eng, C., Ludmir, E. B., Das, P., Minsky, B. D., Taniguchi, C., Smith, G. L., Koay, E. J., Koong, A. C., Delclos, M. E., Skibber, J. M., Rodriguez-Bigas, M. A., You, Y. N., Bednarski, B. K., Tillman, M. M., Chang, G. J., Jennings, K. & Messick, C. A., Feb 3 2022, In: Oncologist. 27, 1, p. 40-47 8 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Definitive results of a phase III adjuvant trial comparing six cycles of FEC-100 to four cycles of AC in women with operable node-negative breast cancer: the NSABP B-36 trial (NRG Oncology)
Geyer, C. E., Bandos, H., Rastogi, P., Jacobs, S. A., Robidoux, A., Fehrenbacher, L., Ward, P. J., Polikoff, J., Brufsky, A. M., Provencher, L., Paterson, A. H. G., Hamm, J. T., Carolla, R. L., Baez-Diaz, L., Julian, T. B., Swain, S. M., Mamounas, E. P. & Wolmark, N., Jun 2022, In: Breast Cancer Research and Treatment. 193, 3, p. 555-564 10 p.Research output: Contribution to journal › Article › peer-review
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Degree of change in right ventricular adaptation measures during axillary Impella support informs risk stratification for early, severe right heart failure following durable LVAD implantation
Hsi, B., Joseph, D., Trachtenberg, B., Bhimaraj, A., Suarez, E. E., Xu, J., Guha, A. & Kim, J. H., Mar 2022, In: Journal of Heart and Lung Transplantation. 41, 3, p. 279-282 4 p.Research output: Contribution to journal › Article › peer-review
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Delayed Carbon Monoxide Optic Neuropathy
Brocca, D., Pellegrini, F., Cuna, A., Leonardi, F. & Lee, A. G., Mar 1 2022, In: Journal of Neuro-Ophthalmology. 42, 1, p. E326-E330Research output: Contribution to journal › Letter › peer-review
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Delayed medical care due to transportation barriers among adults with atherosclerotic cardiovascular disease
Acquah, I., Hagan, K., Valero-Elizondo, J., Javed, Z., Butt, S. A., Mahajan, S., Taha, M. B., Hyder, A. A., Mossialos, E., Cainzos-Achirica, M. & Nasir, K., Mar 2022, In: American Heart Journal. 245, p. 60-69 10 p.Research output: Contribution to journal › Article › peer-review
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Delivery strategies of RNA therapeutics to leukocytes
Tarab-Ravski, D., Stotsky-Oterin, L. & Peer, D., Feb 2022, In: Journal of Controlled Release. 342, p. 362-371 10 p.Research output: Contribution to journal › Article › peer-review
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Delphi consensus recommendation for optimization of pulmonary hypertension therapy focusing on switching from a phosphodiesterase 5 inhibitor to riociguat
Rahaghi, F. F., Balasubramanian, V. P., Bourge, R. C., Burger, C. D., Chakinala, M. M., Eggert, M. S., Elwing, J. M., Feldman, J., King, C., Klinger, J. R., Mathai, S. C., McConnell, J. W., Palevsky, H. I., Restrepo-Jaramillo, R., Safdar, Z., Sager, J. S., Sood, N., Sulica, R., White, R. J. & Hill, N. S., Apr 2022, In: Pulmonary Circulation. 12, 2, e12055.Research output: Contribution to journal › Article › peer-review
Open Access -
Delta Variants of SARS-CoV-2 Cause Significantly Increased Vaccine Breakthrough COVID-19 Cases in Houston, Texas
Christensen, P. A., Olsen, R. J., Long, S. W., Subedi, S., Davis, J. J., Hodjat, P., Walley, D. R., Kinskey, J. C., Ojeda Saavedra, M., Pruitt, L., Reppond, K., Shyer, M. N., Cambric, J., Gadd, R., Thakur, R. M., Batajoo, A., Mangham, R., Pena, S., Trinh, T., Yerramilli, P. & 5 others, , Feb 2022, In: American Journal of Pathology. 192, 2, p. 320-331 12 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Dental hygienists' scope of practice regulations and preventable non-traumatic dental emergency department visits: A cross-sectional study of 10 U.S. states
Akinlotan, M. A., Ferdinand, A. O., Maxey, H. L., Bolin, JN. & Morrisey, M. A., 2022, (Accepted/In press) In: Community Dentistry and Oral Epidemiology.Research output: Contribution to journal › Article › peer-review
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Design, Synthesis, and Evaluation of PD-1/PD-L1 Antagonists Bearing a Benzamide Scaffold
Lu, L., Qi, Z., Wang, T., Zhang, X., Zhang, K., Wang, K., Cheng, Y., Xiao, Y., Li, Z. & Jiang, S., Apr 14 2022, In: ACS Medicinal Chemistry Letters. 13, 4, p. 586-592 7 p.Research output: Contribution to journal › Article › peer-review
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Design, Synthesis, and Targeted Delivery of an Immune Stimulant that Selectively Reactivates Exhausted CAR T Cells
Napoleon, J. V., Zhang, B., Luo, Q., Srinivasarao, M. & Low, P. S., Apr 4 2022, In: Angewandte Chemie - International Edition. 61, 15, e202113341.Research output: Contribution to journal › Article › peer-review
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Design and characterization of fibroblast activation protein targeted pan-cancer imaging agent for fluorescence-guided surgery of solid tumors
Mukkamala, R., Lindeman, S. D., Kragness, K. A., Shahriar, I., Srinivasarao, M. & Low, P. S., Feb 22 2022, In: Journal of Materials Chemistry B. 10, 12, p. 2038-2046 9 p.Research output: Contribution to journal › Article › peer-review
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Design and Integration of Mobile Health Technology in the Treatment of Orthopaedic Surgery: A Qualitative Study
Bruce, CR., Jones, S. L., Kash, B. A., Park, K. J., Schwartz, R., Saldana, R., Zheng, F., Desai, S. N., Harrison, P., Vinh, T., Khleif, A., Tran, N., P, B., Shallcross, J., Giammattei, C. & Sol, J., 2022, In: ACI Open. 6, 1Research output: Contribution to journal › Article › peer-review
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Designing devices to communicate effectively with intensive care nurses to prevent pressure injuries: A qualitative study
Kovach, J. V. & Pollonini, L., Aug 2022, In: Intensive and Critical Care Nursing. 71, 103244.Research output: Contribution to journal › Article › peer-review
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Desmoplakin (Dsp) conditional knockout in NR5A1+ somatic cells affects germ cell survival in developing mouse gonads
Piprek, R. P., Rams-Pociecha, I., Zdanowski, R., Kloc, M. & Kubiak, J. Z., Feb 24 2022, In: Reproduction. 163, 4, p. 199-207 9 p.Research output: Contribution to journal › Article › peer-review
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Detection and Characterization of Bacterial Biofilms and Biofilm-Based Sensors
Funari, R. & Shen, A. Q., Feb 25 2022, In: ACS Sensors. 7, 2, p. 347-357 11 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Detection and Monitoring of Interstitial Lung Disease in Patients with Systemic Sclerosis
Khanna, S. A., Nance, J. W. & Suliman, S. A., May 2022, In: Current Rheumatology Reports. 24, 5, p. 166-173 8 p.Research output: Contribution to journal › Review article › peer-review
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Determinants of Incident Atherosclerotic Cardiovascular Disease Events Among Those With Absent Coronary Artery Calcium: Multi-Ethnic Study of Atherosclerosis
Al Rifai, M., Blaha, M. J., Nambi, V., Shea, S. J. C., Michos, E. D., Blumenthal, R. S., Ballantyne, C. M., Szklo, M., Greenland, P., Miedema, M. D., Nasir, K., Rotter, J. I., Guo, X., Yao, J., Post, W. S. & Virani, S. S., Jan 25 2022, In: Circulation. 145, 4, p. 259-267 9 p.Research output: Contribution to journal › Article › peer-review
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Determinants of left atrial reservoir and pump strain and use of atrial strain for evaluation of left ventricular filling pressure
Inoue, K., Khan, F. H., Remme, E. W., Ohte, N., García-Izquierdo, E., Chetrit, M., Moñivas-Palomero, V., Mingo-Santos, S., Andersen, Ø. S., Gude, E., Andreassen, A. K., Wang, T. K. M., Kikuchi, S., Stugaard, M., Ha, J. W., Klein, A. L., Nagueh, S. F. & Smiseth, O. A., Jan 1 2022, In: European Heart Journal Cardiovascular Imaging. 23, 1, p. 61-70 10 p.Research output: Contribution to journal › Article › peer-review
Open Access10 Scopus citations -
Determining clinical course of diffuse large B-cell lymphoma using targeted transcriptome and machine learning algorithms
Albitar, M., Zhang, H., Goy, A., Xu-Monette, Z. Y., Bhagat, G., Visco, C., Tzankov, A., Fang, X., Zhu, F., Dybkaer, K., Chiu, A., Tam, W., Zu, Y., Hsi, E. D., Hagemeister, F. B., Huh, J., Ponzoni, M., Ferreri, A. J. M., Møller, M. B., Parsons, B. M. & 6 others, , Feb 2022, In: Blood Cancer Journal. 12, 2, 25.Research output: Contribution to journal › Article › peer-review
Open Access -
Determining jumping performance from a single body-worn accelerometer using machine learning
White, M. G. E., Bezodis, N. E., Neville, J., Summers, H. & Rees, P., Feb 2022, In: PLoS ONE. 17, 2 February, e0263846.Research output: Contribution to journal › Article › peer-review
Open Access -
Dethroning Contrast Angiography: A Place for Electroanatomic Mapping?
Kleiman, N. S., Feb 2022, In: JACC: Basic to Translational Science. 7, 2, p. 143-145 3 p.Research output: Contribution to journal › Editorial › peer-review
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Development and validation of a quantitative reactive stroma biomarker (qRS) for prostate cancer prognosis
Ruder, S., Gao, Y., Ding, Y., Bu, P., Miles, B., De Marzo, A., Wheeler, T., McKenney, J. K., Auman, H., Fazli, L., Simko, J., Hurtado-Coll, A., Troyer, D. A., Carroll, P. R., Gleave, M., Platz, E., Trock, B., Han, M., Sayeeduddin, M., True, L. D. & 10 others, , Apr 2022, In: Human Pathology. 122, p. 84-91 8 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Development and Validation of a Risk Score for Respiratory Failure After Cardiac Surgery
Zainab, A., Nguyen, D. T., Graviss, E. A., Fatima, S., Masud, F. N. & MacGillivray, T. E., Feb 2022, In: The Annals of thoracic surgery. 113, 2, p. 577-584 8 p.Research output: Contribution to journal › Article › peer-review
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Development and Validation of a Scoring System for Assessment of Clinical Failure after Pediatric Robot-Assisted Laparoscopic Extravesical Ureteral Reimplantation: A Multi-Center Study
Koh, C. J., Kim, K. S., Gerber, J. A., Bhatia, V., Zhu, H., Baek, M. & Song, S. H., Mar 1 2022, In: Journal of Clinical Medicine. 11, 5, 1327.Research output: Contribution to journal › Article › peer-review
Open Access -
Development and validation of self-efficacy and intention measures for spending time in nature
Maddock, J. E., Suess, C., Bratman, G. N., Smock, C., Kellstedt, D., Gustat, J., Perry, C. K. & Kaczynski, A. T., Dec 2022, In: BMC Psychology. 10, 1, 51.Research output: Contribution to journal › Article › peer-review
Open Access -
Development of 3D Printed Mitral Valve Constructs for Transcatheter Device Modeling of Tissue and Device Deformation
Vukicevic, M., Mehta, S. M., Grande-Allen, K. J. & Little, S. H., Apr 2022, In: Annals of Biomedical Engineering. 50, 4, p. 426-439 14 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Development of a TCR-like antibody and chimeric antigen receptor against NY-ESO-1/HLA-A2 for cancer immunotherapy
Liu, X., Xu, Y., Xiong, W., Yin, B., Huang, Y., Chu, J., Xing, C., Qian, C., Du, Y., Duan, T., Wang, H. Y., Zhang, N., Yu, J. S., An, Z. & Wang, R., Mar 1 2022, In: Journal for immunotherapy of cancer. 10, 3Research output: Contribution to journal › Article › peer-review
Open Access -
Diabetes Status Modifies the Association Between Different Measures of Obesity and Heart Failure Risk Among Older Adults: A Pooled Analysis of Community-Based NHLBI Cohorts
Patel, K. V., Segar, M. W., Lavie, C. J., Kondamudi, N., Neeland, I. J., Almandoz, J. P., Martin, C. K., Carbone, S., Butler, J., Powell-Wiley, T. M. & Pandey, A., Jan 25 2022, In: Circulation. 145, 4, p. 268-278 11 p.Research output: Contribution to journal › Article › peer-review
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Diagnosis of cardiac sarcoidosis: a primer for non-imagers
Agrawal, T., Saleh, Y., Sukkari, M. H., Alnabelsi, T. S., Khan, M., Kassi, M., Bhimaraj, A. & Al-Mallah, M., Jul 2022, In: Heart Failure Reviews. 27, 4, p. 1223-1233 11 p.Research output: Contribution to journal › Review article › peer-review
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Diagnostic and Therapeutic Challenges
Pece, A., Fossataro, F., Rossiello, M., Schefler, A. C. & McDonald, H. R., Jul 1 2022, In: Retina. 42, 7, p. 1411-1415 5 p.Research output: Contribution to journal › Article › peer-review
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Diagnostic Value of Cardiac Magnetic Resonance Imaging and Intracoronary Optical Coherence Tomography in Patients With a Working Diagnosis of Myocardial Infarction With Non-obstructive Coronary Arteries – A Systematic Review and Meta-analysis
Machanahalli Balakrishna, A., Ismayl, M., Thandra, A., Walters, R., Ganesan, V., Anugula, D., Shah, D. J. & Aboeata, A., 2022, (Accepted/In press) In: Current Problems in Cardiology. 101126.Research output: Contribution to journal › Review article › peer-review
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Differences in the attitudes towards the opioid crisis between metropolitan and rural counties in Central Texas: Secondary data analysis using cross-sectional data
Ory, M. G., Lee, S., Smith, M. L., Alonzo, J. P., Clark, H. R. & Burdine, J. N., Apr 2022, In: Preventive Medicine Reports. 26, 101757.Research output: Contribution to journal › Article › peer-review
Open Access -
Differential proteome profile, biological pathways, and network relationships of osteogenic proteins in calcified human aortic valves
Han, R. I., Hu, C. W., Loose, D. S., Yang, L., Li, L., Connell, J. P., Reardon, M. J., Lawrie, G. M., Qutub, A. A., Morrisett, J. D. & Grande-Allen, K. J., Feb 2022, In: Heart and Vessels. 37, 2, p. 347-358 12 p.Research output: Contribution to journal › Article › peer-review