Projects per year
Personal profile
Personal profile
Dr. Fuhai Li received his Ph.D. in applied mathematics at Peking University, and did his pre-doctoral and postdoctoral training in Bioinformatics at Harvard Medical School and Houston Methodist Research Institute. Dr. Li has more than seven years of training and experience in bioinformatics on several research projects funded by NIH, DoD, CPRIT, and other public and private funding sources. He aims to bring better patient care and drug development through his highly collaborative research in bioinformatics and computational biology in the emerging field of big data to knowledge. In particular, he aims to address technical and computational challenges in solving disease problems, including: precision medicine for biomarker identification, drug repositioning, drug combination discovery, and personalized drug response prediction by integrating and analyzing large-scale genomic, imaging, clinical, and environmental data; and tumor-microenvironment interaction modeling to uncover and model the roles of the tumor-niche interactions in tumor development, metastasis, and drug resistance through the integration of genomics and imaging data.
Research interests
Systematic integration of diverse and heterogeneous data resources and subsequent discovery of the embedded knowledge from integrative datasets requires the combination of advanced mathematical approaches and domain knowledge in biomedicine. This emerging field fits extremely well with his experience, expertise, and research interests. Through Dr. Li's highly collaborative research in bioinformatics and computational biology in the emerging field of big data, he aims to bring better patient care to the clinic and enhance drug development In particular, he aims to address technical and computational challenges through use of
-Precision medicine for biomarker identification, drug repositioning, and drug combination discovery
-Personalized drug response prediction by integrating and analyzing large-scale genomic, imaging, clinical, and environmental data
-Tumor-microenvironment interaction modeling to uncover and model the roles of the tumor-niche interactions in tumor development, metastasis, and drug resistance through the integration of genomics and imaging data
Education/Academic qualification
Radiology, Postdoctoral Fellowship, Baylor College of Medicine
Postdoctoral Fellowship, Harvard University
Applied Mathematical Sciences, PhD, Peking University
External positions
Assistant Professor of Biomedical Informatics, Ohio State University
Feb 2016 → …
Research Area Keywords
- Systems Medicine & Bioinformatics
- Cancer
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Collaborations and top research areas from the last five years
Projects
- 3 Finished
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Modeling tumor-stroma crosstalk in lung cancer to identify targets for therapy
Wong, S. T., Li, F. & Zhao, H.
7/2/15 → 6/30/20
Project: Federal Funding Agencies
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A Label-Free and Chemical-Selective Microendoscope to Enhance Prostate Cancer Surgical Outcomes
9/30/12 → 9/29/17
Project: Federal Funding Agencies
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itNETZ: Integrative and Translational Network-based Cellular Signature Analyzer
National Heart Lung and Blood Institute
9/24/11 → 4/12/13
Project: Federal Funding Agencies
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Deep learning models to predict primary open-angle glaucoma
Zhou, R., Philip Miller, J., Gordon, M., Kass, M., Lin, M., Peng, Y., Li, F., Feng, J. & Liu, L., 2024, In: Stat. 13, 1, e649.Research output: Contribution to journal › Article › peer-review
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PathFinder: a novel graph transformer model to infer multi-cell intra- and inter-cellular signaling pathways and communications
Feng, J., Song, H., Province, M., Li, G., Payne, P. R. O., Chen, Y. & Li, F., 2024, In: Frontiers in Cellular Neuroscience. 18, 1369242.Research output: Contribution to journal › Article › peer-review
Open Access -
Proteo-genomics of soluble TREM2 in cerebrospinal fluid provides novel insights and identifies novel modulators for Alzheimer’s disease
Wang, L., Nykänen, N. P., Western, D., Gorijala, P., Timsina, J., Li, F., Wang, Z., Ali, M., Yang, C., Liu, M., Brock, W., Marquié, M., Boada, M., Alvarez, I., Aguilar, M., Pastor, P., Ruiz, A., Puerta, R., Orellana, A., Rutledge, J., & 13 others , Dec 2024, In: Molecular Neurodegeneration. 19, 1, 1.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
RETHINKING THE POWER OF GRAPH CANONIZATION IN GRAPH REPRESENTATION LEARNING WITH STABILITY
Dong, Z., Zhang, M., Payne, P. R. O., Province, M. A., Cruchaga, C., Zhao, T., Li, F. & Chen, Y., 2024.Research output: Contribution to conference › Paper › peer-review
1 Scopus citations -
sc2MeNetDrug: A computational tool to uncover inter-cell signaling targets and identify relevant drugs based on single cell RNA-seq data
Feng, J., Goedegebuure, S. P., Zeng, A., Bi, Y., Wang, T., Payne, P., Ding, L., DeNardo, D., Hawkins, W., Fields, R. C. & Li, F., Jan 2024, In: PLoS Computational Biology. 20, 1, e1011785.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations